Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a2Q3U962 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gm10576-201ENSMUST00000191927 825 ntBASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gm6089-201ENSMUST00000197666 938 ntBASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a2Q3U962 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.93■□□□□ 0.78
Col5a2Q3U962 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Gm25745-201ENSMUST00000174945 133 ntBASIC19.93■□□□□ 0.78
Col5a2Q3U962 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.93■□□□□ 0.78
Col5a2Q3U962 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col5a2Q3U962 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Gm11780-201ENSMUST00000136880 516 ntBASIC19.92■□□□□ 0.78
Col5a2Q3U962 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Gm7506-201ENSMUST00000207758 815 ntBASIC19.92■□□□□ 0.78
Col5a2Q3U962 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a2Q3U962 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.91■□□□□ 0.78
Col5a2Q3U962 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a2Q3U962 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Gm12497-201ENSMUST00000138778 237 ntBASIC19.9■□□□□ 0.78
Col5a2Q3U962 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.9■□□□□ 0.78
Col5a2Q3U962 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.9■□□□□ 0.78
Col5a2Q3U962 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col5a2Q3U962 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col5a2Q3U962 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col5a2Q3U962 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.89■□□□□ 0.77
Col5a2Q3U962 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a2Q3U962 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a2Q3U962 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms