Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Fndc4Q3TR08 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fndc4Q3TR08 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Gm10418-201ENSMUST00000100943 576 ntBASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Gm13158-201ENSMUST00000122007 736 ntBASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Gm10138-203ENSMUST00000206952 366 ntBASIC14.35□□□□□ -0.11
Fndc4Q3TR08 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.35□□□□□ -0.11
Fndc4Q3TR08 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Mir8112-201ENSMUST00000184382 131 ntBASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Gm18666-201ENSMUST00000190039 958 ntBASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fndc4Q3TR08 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.33□□□□□ -0.11
Fndc4Q3TR08 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Fndc4Q3TR08 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Fndc4Q3TR08 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fndc4Q3TR08 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.33□□□□□ -0.11
Fndc4Q3TR08 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Fndc4Q3TR08 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Fndc4Q3TR08 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fndc4Q3TR08 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Fndc4Q3TR08 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Fndc4Q3TR08 Gm13401-201ENSMUST00000117074 291 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms