Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhej1Q3KNJ2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nhej1Q3KNJ2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nhej1Q3KNJ2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Gm12441-201ENSMUST00000121806 588 ntBASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Nhej1Q3KNJ2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms