Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col19a1Q0VF58 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col19a1Q0VF58 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col19a1Q0VF58 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Col19a1Q0VF58 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col19a1Q0VF58 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Mir6956-201ENSMUST00000183598 62 ntBASIC17.88■□□□□ 0.45
Col19a1Q0VF58 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms