Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a1Q00780 Gm6296-201ENSMUST00000222599 943 ntBASIC14.31□□□□□ -0.12
Col8a1Q00780 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a1Q00780 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a1Q00780 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a1Q00780 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a1Q00780 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a1Q00780 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.31□□□□□ -0.12
Col8a1Q00780 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col8a1Q00780 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Gm7862-201ENSMUST00000121461 292 ntBASIC14.3□□□□□ -0.12
Col8a1Q00780 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.3□□□□□ -0.12
Col8a1Q00780 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a1Q00780 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Col8a1Q00780 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.29□□□□□ -0.12
Col8a1Q00780 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.29□□□□□ -0.12
Col8a1Q00780 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Gm6736-201ENSMUST00000166583 948 ntBASIC14.29□□□□□ -0.12
Col8a1Q00780 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.29□□□□□ -0.12
Col8a1Q00780 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col8a1Q00780 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a1Q00780 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Col8a1Q00780 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Gm11779-201ENSMUST00000118541 368 ntBASIC14.28□□□□□ -0.12
Col8a1Q00780 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.28□□□□□ -0.12
Col8a1Q00780 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Col8a1Q00780 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a1Q00780 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a1Q00780 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a1Q00780 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a1Q00780 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col8a1Q00780 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Col8a1Q00780 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Col8a1Q00780 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.27□□□□□ -0.12
Col8a1Q00780 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms