Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Npas1P97459 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.14□□□□□ -0.15
Npas1P97459 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.14□□□□□ -0.15
Npas1P97459 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.14□□□□□ -0.15
Npas1P97459 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.14□□□□□ -0.15
Npas1P97459 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.14□□□□□ -0.15
Npas1P97459 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Npas1P97459 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.14□□□□□ -0.15
Npas1P97459 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npas1P97459 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.13□□□□□ -0.15
Npas1P97459 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Npas1P97459 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Npas1P97459 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.13□□□□□ -0.15
Npas1P97459 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.13□□□□□ -0.15
Npas1P97459 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Npas1P97459 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Npas1P97459 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Npas1P97459 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.12□□□□□ -0.15
Npas1P97459 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.12□□□□□ -0.15
Npas1P97459 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.12□□□□□ -0.15
Npas1P97459 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Npas1P97459 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.12□□□□□ -0.15
Npas1P97459 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Npas1P97459 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Npas1P97459 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Npas1P97459 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.11□□□□□ -0.15
Npas1P97459 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Npas1P97459 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Npas1P97459 Gm10493-201ENSMUST00000097270 612 ntBASIC14.11□□□□□ -0.15
Npas1P97459 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Npas1P97459 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Npas1P97459 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Npas1P97459 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.1□□□□□ -0.15
Npas1P97459 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.1□□□□□ -0.15
Npas1P97459 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Npas1P97459 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms