Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.04■□□□□ 0.32
Cdh6P97326 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdh6P97326 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh6P97326 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdh6P97326 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cdh6P97326 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdh6P97326 Actl10-202ENSMUST00000226583 1501 ntBASIC17.03■□□□□ 0.32
Cdh6P97326 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdh6P97326 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdh6P97326 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.03■□□□□ 0.32
Cdh6P97326 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.03■□□□□ 0.32
Cdh6P97326 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.03■□□□□ 0.32
Cdh6P97326 Gm9987-201ENSMUST00000069768 567 ntBASIC17.03■□□□□ 0.32
Cdh6P97326 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cdh6P97326 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdh6P97326 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh6P97326 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.02■□□□□ 0.32
Cdh6P97326 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.02■□□□□ 0.32
Cdh6P97326 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.02■□□□□ 0.32
Cdh6P97326 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdh6P97326 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Cdh6P97326 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Cdh6P97326 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cdh6P97326 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh6P97326 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh6P97326 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh6P97326 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.02■□□□□ 0.31
Cdh6P97326 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh6P97326 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cdh6P97326 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.02■□□□□ 0.31
Cdh6P97326 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh6P97326 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdh6P97326 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdh6P97326 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh6P97326 Gm13186-201ENSMUST00000118031 316 ntBASIC17.01■□□□□ 0.31
Cdh6P97326 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdh6P97326 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdh6P97326 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh6P97326 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh6P97326 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh6P97326 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh6P97326 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh6P97326 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh6P97326 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cdh6P97326 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17■□□□□ 0.31
Cdh6P97326 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh6P97326 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cdh6P97326 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms