Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccl21aP84444 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl21aP84444 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl21aP84444 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ccl21aP84444 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccl21aP84444 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ccl21aP84444 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.01□□□□□ -0.17
Ccl21aP84444 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccl21aP84444 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl21aP84444 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccl21aP84444 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl21aP84444 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14□□□□□ -0.17
Ccl21aP84444 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Gm45683-201ENSMUST00000210825 1247 ntBASIC14□□□□□ -0.17
Ccl21aP84444 AV026068-213ENSMUST00000223675 1171 ntBASIC14□□□□□ -0.17
Ccl21aP84444 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14□□□□□ -0.17
Ccl21aP84444 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccl21aP84444 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl21aP84444 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14□□□□□ -0.17
Ccl21aP84444 Gm43545-201ENSMUST00000196765 2779 ntBASIC14□□□□□ -0.17
Ccl21aP84444 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccl21aP84444 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccl21aP84444 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccl21aP84444 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ccl21aP84444 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.99□□□□□ -0.17
Ccl21aP84444 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.99□□□□□ -0.17
Ccl21aP84444 Gm7506-201ENSMUST00000207758 815 ntBASIC13.99□□□□□ -0.17
Ccl21aP84444 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccl21aP84444 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccl21aP84444 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.99□□□□□ -0.17
Ccl21aP84444 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl21aP84444 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms