Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CiitaP79621 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CiitaP79621 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CiitaP79621 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.24■□□□□ 0.51
CiitaP79621 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.24■□□□□ 0.51
CiitaP79621 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.24■□□□□ 0.51
CiitaP79621 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CiitaP79621 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.23■□□□□ 0.51
CiitaP79621 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.23■□□□□ 0.51
CiitaP79621 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.23■□□□□ 0.51
CiitaP79621 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.23■□□□□ 0.51
CiitaP79621 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Gm29707-201ENSMUST00000196325 491 ntBASIC18.23■□□□□ 0.51
CiitaP79621 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CiitaP79621 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CiitaP79621 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CiitaP79621 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CiitaP79621 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.22■□□□□ 0.51
CiitaP79621 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Gm18421-201ENSMUST00000204122 625 ntBASIC18.22■□□□□ 0.51
CiitaP79621 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CiitaP79621 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CiitaP79621 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CiitaP79621 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CiitaP79621 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Gm15794-201ENSMUST00000120182 631 ntBASIC18.21■□□□□ 0.51
CiitaP79621 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Gm27742-201ENSMUST00000184667 60 ntBASIC18.21■□□□□ 0.51
CiitaP79621 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.21■□□□□ 0.51
CiitaP79621 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CiitaP79621 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CiitaP79621 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
CiitaP79621 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.2■□□□□ 0.5
CiitaP79621 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.2■□□□□ 0.5
CiitaP79621 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.2■□□□□ 0.5
CiitaP79621 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.2■□□□□ 0.5
CiitaP79621 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CiitaP79621 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms