Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim4P70271 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pdlim4P70271 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.99□□□□□ -0.17
Pdlim4P70271 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm11539-201ENSMUST00000119837 557 ntBASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm13436-201ENSMUST00000120418 567 ntBASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Pdlim4P70271 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.99□□□□□ -0.17
Pdlim4P70271 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.99□□□□□ -0.17
Pdlim4P70271 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim4P70271 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pdlim4P70271 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Pdlim4P70271 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pdlim4P70271 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.98□□□□□ -0.17
Pdlim4P70271 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.98□□□□□ -0.17
Pdlim4P70271 Gm43799-201ENSMUST00000201845 579 ntBASIC13.98□□□□□ -0.17
Pdlim4P70271 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.98□□□□□ -0.17
Pdlim4P70271 Il3ra-202ENSMUST00000223589 738 ntBASIC13.98□□□□□ -0.17
Pdlim4P70271 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.98□□□□□ -0.17
Pdlim4P70271 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pdlim4P70271 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim4P70271 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.97□□□□□ -0.17
Pdlim4P70271 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Mir7071-201ENSMUST00000184847 69 ntBASIC13.97□□□□□ -0.17
Pdlim4P70271 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pdlim4P70271 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pdlim4P70271 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.97□□□□□ -0.17
Pdlim4P70271 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.97□□□□□ -0.17
Pdlim4P70271 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim4P70271 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pdlim4P70271 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pdlim4P70271 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Gm13559-201ENSMUST00000120476 863 ntBASIC13.96□□□□□ -0.17
Pdlim4P70271 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.96□□□□□ -0.17
Pdlim4P70271 Gm2274-201ENSMUST00000184539 609 ntBASIC13.96□□□□□ -0.17
Pdlim4P70271 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdlim4P70271 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim4P70271 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim4P70271 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms