Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hps5P59438 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hps5P59438 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.85■□□□□ 0.61
Hps5P59438 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.85■□□□□ 0.61
Hps5P59438 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Hps5P59438 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hps5P59438 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hps5P59438 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hps5P59438 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps5P59438 Gm11950-201ENSMUST00000121615 838 ntBASIC18.84■□□□□ 0.61
Hps5P59438 Gm5864-201ENSMUST00000202263 970 ntBASIC18.84■□□□□ 0.61
Hps5P59438 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.84■□□□□ 0.61
Hps5P59438 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.84■□□□□ 0.61
Hps5P59438 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Hps5P59438 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps5P59438 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps5P59438 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hps5P59438 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hps5P59438 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps5P59438 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.83■□□□□ 0.61
Hps5P59438 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Hps5P59438 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.83■□□□□ 0.61
Hps5P59438 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hps5P59438 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hps5P59438 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps5P59438 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps5P59438 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps5P59438 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hps5P59438 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.83■□□□□ 0.6
Hps5P59438 Mir1668-201ENSMUST00000184114 107 ntBASIC18.83■□□□□ 0.6
Hps5P59438 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.83■□□□□ 0.6
Hps5P59438 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.83■□□□□ 0.6
Hps5P59438 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Hps5P59438 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hps5P59438 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hps5P59438 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.82■□□□□ 0.6
Hps5P59438 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hps5P59438 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hps5P59438 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.82■□□□□ 0.6
Hps5P59438 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.82■□□□□ 0.6
Hps5P59438 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hps5P59438 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.82■□□□□ 0.6
Hps5P59438 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.81■□□□□ 0.6
Hps5P59438 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.81■□□□□ 0.6
Hps5P59438 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.81■□□□□ 0.6
Hps5P59438 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Mir8098-201ENSMUST00000184011 137 ntBASIC18.81■□□□□ 0.6
Hps5P59438 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.81■□□□□ 0.6
Hps5P59438 Birc2-201ENSMUST00000054878 378 ntBASIC18.81■□□□□ 0.6
Hps5P59438 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hps5P59438 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Hps5P59438 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hps5P59438 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Gm13884-201ENSMUST00000118103 829 ntBASIC18.8■□□□□ 0.6
Hps5P59438 Gm27742-201ENSMUST00000184667 60 ntBASIC18.8■□□□□ 0.6
Hps5P59438 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hps5P59438 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hps5P59438 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hps5P59438 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hps5P59438 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hps5P59438 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms