Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Gm18421-201ENSMUST00000204122 625 ntBASIC20.62■□□□□ 0.89
Tm6sf1P58749 Gm18101-201ENSMUST00000215769 548 ntBASIC20.62■□□□□ 0.89
Tm6sf1P58749 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tm6sf1P58749 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Mir7071-201ENSMUST00000184847 69 ntBASIC20.61■□□□□ 0.89
Tm6sf1P58749 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tm6sf1P58749 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.6■□□□□ 0.89
Tm6sf1P58749 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Gm27389-201ENSMUST00000183622 195 ntBASIC20.6■□□□□ 0.89
Tm6sf1P58749 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.6■□□□□ 0.89
Tm6sf1P58749 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.6■□□□□ 0.89
Tm6sf1P58749 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.6■□□□□ 0.89
Tm6sf1P58749 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.6■□□□□ 0.89
Tm6sf1P58749 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tm6sf1P58749 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tm6sf1P58749 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.59■□□□□ 0.89
Tm6sf1P58749 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tm6sf1P58749 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tm6sf1P58749 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tm6sf1P58749 Gm37722-201ENSMUST00000193757 208 ntBASIC20.58■□□□□ 0.89
Tm6sf1P58749 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tm6sf1P58749 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tm6sf1P58749 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tm6sf1P58749 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tm6sf1P58749 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tm6sf1P58749 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Tm6sf1P58749 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tm6sf1P58749 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tm6sf1P58749 Gm10013-201ENSMUST00000106074 672 ntBASIC20.57■□□□□ 0.88
Tm6sf1P58749 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Tm6sf1P58749 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms