Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx6P54823 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx6P54823 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx6P54823 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ddx6P54823 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx6P54823 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.07■□□□□ 0.32
Ddx6P54823 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Gm27459-201ENSMUST00000184860 107 ntBASIC17.07■□□□□ 0.32
Ddx6P54823 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.07■□□□□ 0.32
Ddx6P54823 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx6P54823 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx6P54823 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx6P54823 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx6P54823 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx6P54823 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ddx6P54823 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.06■□□□□ 0.32
Ddx6P54823 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.06■□□□□ 0.32
Ddx6P54823 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx6P54823 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Gm28659-201ENSMUST00000188013 759 ntBASIC17.06■□□□□ 0.32
Ddx6P54823 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.06■□□□□ 0.32
Ddx6P54823 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ddx6P54823 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx6P54823 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx6P54823 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx6P54823 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Ddx6P54823 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.05■□□□□ 0.32
Ddx6P54823 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.05■□□□□ 0.32
Ddx6P54823 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.05■□□□□ 0.32
Ddx6P54823 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx6P54823 Gm43347-201ENSMUST00000200226 580 ntBASIC17.05■□□□□ 0.32
Ddx6P54823 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx6P54823 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx6P54823 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx6P54823 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx6P54823 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Gm44430-201ENSMUST00000203376 995 ntBASIC17.04■□□□□ 0.32
Ddx6P54823 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.04■□□□□ 0.32
Ddx6P54823 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.04■□□□□ 0.32
Ddx6P54823 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.04■□□□□ 0.32
Ddx6P54823 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ddx6P54823 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ddx6P54823 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.04■□□□□ 0.32
Ddx6P54823 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.04■□□□□ 0.32
Ddx6P54823 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx6P54823 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx6P54823 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx6P54823 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx6P54823 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.03■□□□□ 0.32
Ddx6P54823 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.03■□□□□ 0.32
Ddx6P54823 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx6P54823 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx6P54823 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx6P54823 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms