Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nub1P54729 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nub1P54729 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nub1P54729 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nub1P54729 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nub1P54729 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nub1P54729 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nub1P54729 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nub1P54729 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
Nub1P54729 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.08■□□□□ 0.48
Nub1P54729 Gm9987-201ENSMUST00000069768 567 ntBASIC18.08■□□□□ 0.48
Nub1P54729 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nub1P54729 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nub1P54729 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nub1P54729 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Nub1P54729 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nub1P54729 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.08■□□□□ 0.48
Nub1P54729 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.07■□□□□ 0.48
Nub1P54729 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nub1P54729 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nub1P54729 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.07■□□□□ 0.48
Nub1P54729 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.07■□□□□ 0.48
Nub1P54729 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.07■□□□□ 0.48
Nub1P54729 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nub1P54729 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nub1P54729 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.07■□□□□ 0.48
Nub1P54729 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nub1P54729 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.06■□□□□ 0.48
Nub1P54729 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nub1P54729 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nub1P54729 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.06■□□□□ 0.48
Nub1P54729 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nub1P54729 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nub1P54729 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nub1P54729 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nub1P54729 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.05■□□□□ 0.48
Nub1P54729 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nub1P54729 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Nub1P54729 Gm16061-201ENSMUST00000122167 857 ntBASIC18.05■□□□□ 0.48
Nub1P54729 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.05■□□□□ 0.48
Nub1P54729 Mir7071-201ENSMUST00000184847 69 ntBASIC18.05■□□□□ 0.48
Nub1P54729 Gm18959-201ENSMUST00000208954 655 ntBASIC18.05■□□□□ 0.48
Nub1P54729 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.05■□□□□ 0.48
Nub1P54729 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nub1P54729 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nub1P54729 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nub1P54729 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Nub1P54729 Gm45058-201ENSMUST00000205810 766 ntBASIC18.04■□□□□ 0.48
Nub1P54729 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Nub1P54729 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Nub1P54729 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.04■□□□□ 0.48
Nub1P54729 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nub1P54729 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms