Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lbx1P52955 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lbx1P52955 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.23■□□□□ 0.19
Lbx1P52955 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lbx1P52955 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lbx1P52955 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lbx1P52955 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Lbx1P52955 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.22■□□□□ 0.19
Lbx1P52955 Gm17271-201ENSMUST00000165535 355 ntBASIC16.22■□□□□ 0.19
Lbx1P52955 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Mir6977-201ENSMUST00000184960 64 ntBASIC16.22■□□□□ 0.19
Lbx1P52955 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.22■□□□□ 0.19
Lbx1P52955 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lbx1P52955 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lbx1P52955 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lbx1P52955 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.21■□□□□ 0.19
Lbx1P52955 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Lbx1P52955 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.21■□□□□ 0.19
Lbx1P52955 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Lbx1P52955 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lbx1P52955 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lbx1P52955 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Lbx1P52955 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Lbx1P52955 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.2■□□□□ 0.18
Lbx1P52955 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lbx1P52955 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lbx1P52955 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lbx1P52955 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Lbx1P52955 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lbx1P52955 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.19■□□□□ 0.18
Lbx1P52955 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.19■□□□□ 0.18
Lbx1P52955 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lbx1P52955 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Gm25745-201ENSMUST00000174945 133 ntBASIC16.19■□□□□ 0.18
Lbx1P52955 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.19■□□□□ 0.18
Lbx1P52955 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.19■□□□□ 0.18
Lbx1P52955 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lbx1P52955 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lbx1P52955 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lbx1P52955 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lbx1P52955 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lbx1P52955 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.19■□□□□ 0.18
Lbx1P52955 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Lbx1P52955 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lbx1P52955 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Lbx1P52955 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lbx1P52955 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lbx1P52955 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms