Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.64■□□□□ 0.25
Pdx1P52946 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdx1P52946 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.63■□□□□ 0.25
Pdx1P52946 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.63■□□□□ 0.25
Pdx1P52946 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdx1P52946 Gm13474-201ENSMUST00000122466 815 ntBASIC16.63■□□□□ 0.25
Pdx1P52946 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Gm7213-201ENSMUST00000215977 950 ntBASIC16.63■□□□□ 0.25
Pdx1P52946 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdx1P52946 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.63■□□□□ 0.25
Pdx1P52946 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.63■□□□□ 0.25
Pdx1P52946 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pdx1P52946 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdx1P52946 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdx1P52946 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pdx1P52946 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pdx1P52946 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.62■□□□□ 0.25
Pdx1P52946 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pdx1P52946 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdx1P52946 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pdx1P52946 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdx1P52946 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdx1P52946 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pdx1P52946 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pdx1P52946 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
Pdx1P52946 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdx1P52946 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.6■□□□□ 0.25
Pdx1P52946 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Gm10231-201ENSMUST00000181584 441 ntBASIC16.6■□□□□ 0.25
Pdx1P52946 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Gm10175-202ENSMUST00000208752 441 ntBASIC16.6■□□□□ 0.25
Pdx1P52946 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdx1P52946 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pdx1P52946 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.6■□□□□ 0.25
Pdx1P52946 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pdx1P52946 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms