Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Lhx3P50481 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lhx3P50481 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Lhx3P50481 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.05■□□□□ 0.32
Lhx3P50481 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Lhx3P50481 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.05■□□□□ 0.32
Lhx3P50481 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lhx3P50481 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx3P50481 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lhx3P50481 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.04■□□□□ 0.32
Lhx3P50481 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lhx3P50481 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx3P50481 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.04■□□□□ 0.32
Lhx3P50481 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.04■□□□□ 0.32
Lhx3P50481 Gm29518-201ENSMUST00000190858 372 ntBASIC17.04■□□□□ 0.32
Lhx3P50481 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.04■□□□□ 0.32
Lhx3P50481 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lhx3P50481 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lhx3P50481 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx3P50481 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx3P50481 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lhx3P50481 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.03■□□□□ 0.32
Lhx3P50481 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.03■□□□□ 0.32
Lhx3P50481 Gm17808-201ENSMUST00000200859 894 ntBASIC17.03■□□□□ 0.32
Lhx3P50481 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.03■□□□□ 0.32
Lhx3P50481 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lhx3P50481 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.03■□□□□ 0.32
Lhx3P50481 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Lhx3P50481 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx3P50481 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx3P50481 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx3P50481 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx3P50481 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Lhx3P50481 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx3P50481 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.02■□□□□ 0.32
Lhx3P50481 Gm29707-201ENSMUST00000196325 491 ntBASIC17.02■□□□□ 0.32
Lhx3P50481 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx3P50481 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx3P50481 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx3P50481 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx3P50481 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lhx3P50481 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Lhx3P50481 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.01■□□□□ 0.31
Lhx3P50481 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.01■□□□□ 0.31
Lhx3P50481 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.01■□□□□ 0.31
Lhx3P50481 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx3P50481 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms