Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.2■□□□□ 0.18
Rph3aP47708 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.2■□□□□ 0.18
Rph3aP47708 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rph3aP47708 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.19■□□□□ 0.18
Rph3aP47708 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rph3aP47708 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.19■□□□□ 0.18
Rph3aP47708 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rph3aP47708 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.19■□□□□ 0.18
Rph3aP47708 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rph3aP47708 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.19■□□□□ 0.18
Rph3aP47708 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.19■□□□□ 0.18
Rph3aP47708 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rph3aP47708 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rph3aP47708 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.18■□□□□ 0.18
Rph3aP47708 Gm11539-201ENSMUST00000119837 557 ntBASIC16.18■□□□□ 0.18
Rph3aP47708 Gm13436-201ENSMUST00000120418 567 ntBASIC16.18■□□□□ 0.18
Rph3aP47708 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rph3aP47708 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.18■□□□□ 0.18
Rph3aP47708 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rph3aP47708 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rph3aP47708 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.17■□□□□ 0.18
Rph3aP47708 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Gm13559-201ENSMUST00000120476 863 ntBASIC16.17■□□□□ 0.18
Rph3aP47708 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rph3aP47708 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.17■□□□□ 0.18
Rph3aP47708 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rph3aP47708 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rph3aP47708 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.16■□□□□ 0.18
Rph3aP47708 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rph3aP47708 Gm2274-201ENSMUST00000184539 609 ntBASIC16.16■□□□□ 0.18
Rph3aP47708 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rph3aP47708 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rph3aP47708 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rph3aP47708 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms