Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.08■□□□□ 0.16
Sox18P43680 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sox18P43680 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Sox18P43680 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.07■□□□□ 0.16
Sox18P43680 Gm2756-201ENSMUST00000195851 400 ntBASIC16.07■□□□□ 0.16
Sox18P43680 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.07■□□□□ 0.16
Sox18P43680 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Sox18P43680 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Gm25007-201ENSMUST00000083808 133 ntBASIC16.07■□□□□ 0.16
Sox18P43680 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.07■□□□□ 0.16
Sox18P43680 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.07■□□□□ 0.16
Sox18P43680 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sox18P43680 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox18P43680 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sox18P43680 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Sox18P43680 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.06■□□□□ 0.16
Sox18P43680 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.06■□□□□ 0.16
Sox18P43680 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.06■□□□□ 0.16
Sox18P43680 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Sox18P43680 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.06■□□□□ 0.16
Sox18P43680 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.06■□□□□ 0.16
Sox18P43680 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox18P43680 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sox18P43680 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.05■□□□□ 0.16
Sox18P43680 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Gm10060-201ENSMUST00000212002 111 ntBASIC16.05■□□□□ 0.16
Sox18P43680 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Sox18P43680 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sox18P43680 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox18P43680 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.04■□□□□ 0.16
Sox18P43680 Gm15467-201ENSMUST00000120582 445 ntBASIC16.04■□□□□ 0.16
Sox18P43680 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Sox18P43680 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Sox18P43680 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Gm10576-201ENSMUST00000191927 825 ntBASIC16.04■□□□□ 0.16
Sox18P43680 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Sox18P43680 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sox18P43680 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox18P43680 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms