Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.87■□□□□ 0.61
Sdc2P43407 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.87■□□□□ 0.61
Sdc2P43407 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sdc2P43407 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Sdc2P43407 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sdc2P43407 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc2P43407 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.87■□□□□ 0.61
Sdc2P43407 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sdc2P43407 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sdc2P43407 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.86■□□□□ 0.61
Sdc2P43407 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.86■□□□□ 0.61
Sdc2P43407 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc2P43407 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.85■□□□□ 0.61
Sdc2P43407 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.85■□□□□ 0.61
Sdc2P43407 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.85■□□□□ 0.61
Sdc2P43407 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sdc2P43407 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sdc2P43407 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc2P43407 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sdc2P43407 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.84■□□□□ 0.61
Sdc2P43407 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Gm20760-201ENSMUST00000179197 648 ntBASIC18.84■□□□□ 0.61
Sdc2P43407 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Gm9731-201ENSMUST00000209480 747 ntBASIC18.84■□□□□ 0.61
Sdc2P43407 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.84■□□□□ 0.61
Sdc2P43407 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc2P43407 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Sdc2P43407 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc2P43407 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Sdc2P43407 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc2P43407 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc2P43407 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc2P43407 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc2P43407 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.83■□□□□ 0.6
Sdc2P43407 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc2P43407 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sdc2P43407 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc2P43407 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sdc2P43407 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sdc2P43407 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.82■□□□□ 0.6
Sdc2P43407 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sdc2P43407 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms