Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.74■□□□□ 0.27
LdlrP35951 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LdlrP35951 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LdlrP35951 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.74■□□□□ 0.27
LdlrP35951 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.74■□□□□ 0.27
LdlrP35951 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LdlrP35951 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
LdlrP35951 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.74■□□□□ 0.27
LdlrP35951 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LdlrP35951 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LdlrP35951 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LdlrP35951 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.73■□□□□ 0.27
LdlrP35951 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LdlrP35951 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LdlrP35951 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LdlrP35951 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.72■□□□□ 0.27
LdlrP35951 Gm43799-201ENSMUST00000201845 579 ntBASIC16.72■□□□□ 0.27
LdlrP35951 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.72■□□□□ 0.27
LdlrP35951 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LdlrP35951 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LdlrP35951 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.71■□□□□ 0.27
LdlrP35951 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LdlrP35951 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LdlrP35951 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LdlrP35951 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LdlrP35951 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LdlrP35951 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LdlrP35951 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LdlrP35951 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LdlrP35951 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LdlrP35951 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.7■□□□□ 0.26
LdlrP35951 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LdlrP35951 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.7■□□□□ 0.26
LdlrP35951 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.7■□□□□ 0.26
LdlrP35951 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.7■□□□□ 0.26
LdlrP35951 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Gm5417-201ENSMUST00000079706 384 ntBASIC16.7■□□□□ 0.26
LdlrP35951 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LdlrP35951 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LdlrP35951 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.69■□□□□ 0.26
LdlrP35951 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms