Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox5P35710 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sox5P35710 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sox5P35710 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Sox5P35710 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox5P35710 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.38■□□□□ 0.53
Sox5P35710 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Sox5P35710 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox5P35710 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox5P35710 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox5P35710 Gm12441-201ENSMUST00000121806 588 ntBASIC18.37■□□□□ 0.53
Sox5P35710 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox5P35710 Gm27000-201ENSMUST00000182943 842 ntBASIC18.37■□□□□ 0.53
Sox5P35710 Gm37856-201ENSMUST00000191634 999 ntBASIC18.37■□□□□ 0.53
Sox5P35710 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox5P35710 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox5P35710 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sox5P35710 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox5P35710 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.36■□□□□ 0.53
Sox5P35710 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sox5P35710 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox5P35710 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Sox5P35710 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Sox5P35710 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sox5P35710 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.35■□□□□ 0.53
Sox5P35710 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.35■□□□□ 0.53
Sox5P35710 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sox5P35710 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.35■□□□□ 0.53
Sox5P35710 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox5P35710 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sox5P35710 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sox5P35710 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox5P35710 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Sox5P35710 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox5P35710 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms