Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Foxa1P35582 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Foxa1P35582 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Foxa1P35582 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Foxa1P35582 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Foxa1P35582 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.55■□□□□ 0.08
Foxa1P35582 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.54■□□□□ 0.08
Foxa1P35582 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.54■□□□□ 0.08
Foxa1P35582 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.54■□□□□ 0.08
Foxa1P35582 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.54■□□□□ 0.08
Foxa1P35582 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.54■□□□□ 0.08
Foxa1P35582 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Foxa1P35582 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.54■□□□□ 0.08
Foxa1P35582 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.54■□□□□ 0.08
Foxa1P35582 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Foxa1P35582 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Foxa1P35582 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Foxa1P35582 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Foxa1P35582 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Foxa1P35582 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Foxa1P35582 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.53■□□□□ 0.08
Foxa1P35582 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Foxa1P35582 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Foxa1P35582 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Foxa1P35582 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Foxa1P35582 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Foxa1P35582 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.52■□□□□ 0.08
Foxa1P35582 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.52■□□□□ 0.08
Foxa1P35582 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.52■□□□□ 0.08
Foxa1P35582 Gm10566-201ENSMUST00000086739 996 ntBASIC15.52■□□□□ 0.08
Foxa1P35582 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Foxa1P35582 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Foxa1P35582 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Foxa1P35582 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Foxa1P35582 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Foxa1P35582 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Foxa1P35582 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Foxa1P35582 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Foxa1P35582 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms