Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Slc6a1P31648 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.5□□□□□ -0.09
Slc6a1P31648 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Slc6a1P31648 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Slc6a1P31648 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a1P31648 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.49□□□□□ -0.09
Slc6a1P31648 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Slc6a1P31648 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.49□□□□□ -0.09
Slc6a1P31648 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Gm4968-201ENSMUST00000071458 858 ntBASIC14.49□□□□□ -0.09
Slc6a1P31648 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a1P31648 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a1P31648 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Slc6a1P31648 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
Slc6a1P31648 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.48□□□□□ -0.09
Slc6a1P31648 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Slc6a1P31648 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a1P31648 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.47□□□□□ -0.09
Slc6a1P31648 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.47□□□□□ -0.09
Slc6a1P31648 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.47□□□□□ -0.09
Slc6a1P31648 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.47□□□□□ -0.09
Slc6a1P31648 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.47□□□□□ -0.09
Slc6a1P31648 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a1P31648 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a1P31648 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms