Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.05□□□□□ -0.16
Col8a2P25318 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col8a2P25318 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col8a2P25318 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Gm11355-201ENSMUST00000121120 306 ntBASIC14.04□□□□□ -0.16
Col8a2P25318 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.04□□□□□ -0.16
Col8a2P25318 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col8a2P25318 Gm5587-201ENSMUST00000206270 674 ntBASIC14.04□□□□□ -0.16
Col8a2P25318 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col8a2P25318 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col8a2P25318 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col8a2P25318 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Col8a2P25318 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col8a2P25318 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col8a2P25318 Gm13186-201ENSMUST00000118031 316 ntBASIC14.03□□□□□ -0.16
Col8a2P25318 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.03□□□□□ -0.16
Col8a2P25318 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Col8a2P25318 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col8a2P25318 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col8a2P25318 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col8a2P25318 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col8a2P25318 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.03□□□□□ -0.16
Col8a2P25318 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.03□□□□□ -0.16
Col8a2P25318 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col8a2P25318 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col8a2P25318 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.02□□□□□ -0.16
Col8a2P25318 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col8a2P25318 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col8a2P25318 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.02□□□□□ -0.16
Col8a2P25318 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col8a2P25318 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Ank2-226ENSMUST00000189368 339 ntBASIC14.02□□□□□ -0.17
Col8a2P25318 Gm8969-201ENSMUST00000199694 526 ntBASIC14.02□□□□□ -0.17
Col8a2P25318 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col8a2P25318 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.02□□□□□ -0.17
Col8a2P25318 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col8a2P25318 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col8a2P25318 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col8a2P25318 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col8a2P25318 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col8a2P25318 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col8a2P25318 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Col8a2P25318 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col8a2P25318 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms