Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.31■□□□□ 0.52
Pde6bP23440 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pde6bP23440 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pde6bP23440 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pde6bP23440 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pde6bP23440 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pde6bP23440 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pde6bP23440 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6bP23440 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.29■□□□□ 0.52
Pde6bP23440 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6bP23440 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pde6bP23440 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.29■□□□□ 0.52
Pde6bP23440 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6bP23440 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.29■□□□□ 0.52
Pde6bP23440 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pde6bP23440 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Pde6bP23440 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6bP23440 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6bP23440 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pde6bP23440 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pde6bP23440 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.28■□□□□ 0.52
Pde6bP23440 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.28■□□□□ 0.52
Pde6bP23440 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.28■□□□□ 0.52
Pde6bP23440 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pde6bP23440 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.28■□□□□ 0.52
Pde6bP23440 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pde6bP23440 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.27■□□□□ 0.52
Pde6bP23440 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.27■□□□□ 0.52
Pde6bP23440 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.27■□□□□ 0.52
Pde6bP23440 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.27■□□□□ 0.52
Pde6bP23440 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.27■□□□□ 0.52
Pde6bP23440 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.27■□□□□ 0.52
Pde6bP23440 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pde6bP23440 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pde6bP23440 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pde6bP23440 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pde6bP23440 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pde6bP23440 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pde6bP23440 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pde6bP23440 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Gm7461-201ENSMUST00000058918 827 ntBASIC18.26■□□□□ 0.51
Pde6bP23440 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pde6bP23440 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.26■□□□□ 0.51
Pde6bP23440 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms