Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.7□□□□□ -0.22
Tnfrsf9P20334 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf9P20334 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf9P20334 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Mir2861-201ENSMUST00000175539 82 ntBASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf9P20334 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf9P20334 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Gm7153-201ENSMUST00000117092 455 ntBASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf9P20334 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf9P20334 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms