Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sdc1P18828 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sdc1P18828 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sdc1P18828 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Sdc1P18828 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Gm10418-201ENSMUST00000100943 576 ntBASIC13.87□□□□□ -0.19
Sdc1P18828 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.87□□□□□ -0.19
Sdc1P18828 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sdc1P18828 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sdc1P18828 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Sdc1P18828 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sdc1P18828 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sdc1P18828 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.86□□□□□ -0.19
Sdc1P18828 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sdc1P18828 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.86□□□□□ -0.19
Sdc1P18828 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sdc1P18828 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.86□□□□□ -0.19
Sdc1P18828 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sdc1P18828 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Sdc1P18828 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sdc1P18828 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Sdc1P18828 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sdc1P18828 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sdc1P18828 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Sdc1P18828 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Sdc1P18828 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.85□□□□□ -0.19
Sdc1P18828 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sdc1P18828 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.85□□□□□ -0.19
Sdc1P18828 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sdc1P18828 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc1P18828 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Sdc1P18828 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc1P18828 Gm12922-201ENSMUST00000120626 809 ntBASIC13.84□□□□□ -0.19
Sdc1P18828 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.84□□□□□ -0.19
Sdc1P18828 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms