Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.63■□□□□ 0.57
Hoxc6P10629 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hoxc6P10629 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc6P10629 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hoxc6P10629 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44357-201ENSMUST00000195897 142 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm19658-201ENSMUST00000196231 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44367-201ENSMUST00000196836 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44350-201ENSMUST00000197197 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44390-201ENSMUST00000197533 144 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44313-201ENSMUST00000198018 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44486-201ENSMUST00000198508 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44314-201ENSMUST00000199263 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44394-201ENSMUST00000199558 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44484-201ENSMUST00000199873 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44466-201ENSMUST00000200264 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Gm44359-201ENSMUST00000200671 138 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.62■□□□□ 0.57
Hoxc6P10629 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxc6P10629 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hoxc6P10629 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hoxc6P10629 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Gm27867-201ENSMUST00000184778 125 ntBASIC18.61■□□□□ 0.57
Hoxc6P10629 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.61■□□□□ 0.57
Hoxc6P10629 Gm44430-201ENSMUST00000203376 995 ntBASIC18.61■□□□□ 0.57
Hoxc6P10629 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.61■□□□□ 0.57
Hoxc6P10629 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Hoxc6P10629 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.61■□□□□ 0.57
Hoxc6P10629 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.61■□□□□ 0.57
Hoxc6P10629 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxc6P10629 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hoxc6P10629 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Hoxc6P10629 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.6■□□□□ 0.57
Hoxc6P10629 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.6■□□□□ 0.57
Hoxc6P10629 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.6■□□□□ 0.57
Hoxc6P10629 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.6■□□□□ 0.57
Hoxc6P10629 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.6■□□□□ 0.57
Hoxc6P10629 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.6■□□□□ 0.57
Hoxc6P10629 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.6■□□□□ 0.57
Hoxc6P10629 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hoxc6P10629 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxc6P10629 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.59■□□□□ 0.57
Hoxc6P10629 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hoxc6P10629 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hoxc6P10629 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms