Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccl1P10146 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccl1P10146 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.12□□□□□ -0.31
Ccl1P10146 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccl1P10146 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ccl1P10146 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Ccl1P10146 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccl1P10146 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccl1P10146 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.11□□□□□ -0.31
Ccl1P10146 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccl1P10146 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Gm13241-201ENSMUST00000094493 780 ntBASIC13.11□□□□□ -0.31
Ccl1P10146 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Ccl1P10146 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccl1P10146 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Ccl1P10146 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccl1P10146 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccl1P10146 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Gm43017-201ENSMUST00000198296 752 ntBASIC13.1□□□□□ -0.31
Ccl1P10146 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccl1P10146 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Ccl1P10146 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccl1P10146 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.09□□□□□ -0.31
Ccl1P10146 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.09□□□□□ -0.31
Ccl1P10146 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccl1P10146 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccl1P10146 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccl1P10146 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccl1P10146 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Ccl1P10146 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccl1P10146 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccl1P10146 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms