Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Hoxc9P09633 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Hoxc9P09633 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hoxc9P09633 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.78■■□□□ 1.08
Hoxc9P09633 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.78■■□□□ 1.08
Hoxc9P09633 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.78■■□□□ 1.08
Hoxc9P09633 Gm2651-201ENSMUST00000203560 838 ntBASIC21.78■■□□□ 1.08
Hoxc9P09633 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Hoxc9P09633 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hoxc9P09633 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hoxc9P09633 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Hoxc9P09633 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.77■■□□□ 1.08
Hoxc9P09633 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Gm6376-201ENSMUST00000209407 580 ntBASIC21.77■■□□□ 1.08
Hoxc9P09633 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.77■■□□□ 1.08
Hoxc9P09633 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hoxc9P09633 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc9P09633 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc9P09633 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc9P09633 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Hoxc9P09633 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.76■■□□□ 1.07
Hoxc9P09633 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Hoxc9P09633 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc9P09633 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Hoxc9P09633 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hoxc9P09633 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.75■■□□□ 1.07
Hoxc9P09633 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.75■■□□□ 1.07
Hoxc9P09633 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Hoxc9P09633 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.75■■□□□ 1.07
Hoxc9P09633 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC21.75■■□□□ 1.07
Hoxc9P09633 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.75■■□□□ 1.07
Hoxc9P09633 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Hoxc9P09633 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hoxc9P09633 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.74■■□□□ 1.07
Hoxc9P09633 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.74■■□□□ 1.07
Hoxc9P09633 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Hoxc9P09633 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hoxc9P09633 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.74■■□□□ 1.07
Hoxc9P09633 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hoxc9P09633 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Hoxc9P09633 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Hoxc9P09633 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Hoxc9P09633 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.73■■□□□ 1.07
Hoxc9P09633 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hoxc9P09633 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.72■■□□□ 1.07
Hoxc9P09633 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hoxc9P09633 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms