Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa9P09631 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.88■□□□□ 0.29
Hoxa9P09631 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hoxa9P09631 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa9P09631 Gm7461-201ENSMUST00000058918 827 ntBASIC16.88■□□□□ 0.29
Hoxa9P09631 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa9P09631 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa9P09631 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa9P09631 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa9P09631 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.87■□□□□ 0.29
Hoxa9P09631 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.87■□□□□ 0.29
Hoxa9P09631 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.87■□□□□ 0.29
Hoxa9P09631 Gm24589-201ENSMUST00000116692 94 ntBASIC16.87■□□□□ 0.29
Hoxa9P09631 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.87■□□□□ 0.29
Hoxa9P09631 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hoxa9P09631 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hoxa9P09631 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.87■□□□□ 0.29
Hoxa9P09631 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa9P09631 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hoxa9P09631 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxa9P09631 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.85■□□□□ 0.29
Hoxa9P09631 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Birc2-201ENSMUST00000054878 378 ntBASIC16.85■□□□□ 0.29
Hoxa9P09631 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Hoxa9P09631 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxa9P09631 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hoxa9P09631 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.84■□□□□ 0.29
Hoxa9P09631 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.84■□□□□ 0.29
Hoxa9P09631 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Hoxa9P09631 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Hoxa9P09631 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.84■□□□□ 0.29
Hoxa9P09631 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxa9P09631 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hoxa9P09631 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hoxa9P09631 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hoxa9P09631 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Hoxa9P09631 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxa9P09631 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms