Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.99□□□□□ -0.01
P06344 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
P06344 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.99□□□□□ -0.01
P06344 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.99□□□□□ -0.01
P06344 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.99□□□□□ -0.01
P06344 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Gm10566-201ENSMUST00000086739 996 ntBASIC14.99□□□□□ -0.01
P06344 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
P06344 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
P06344 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
P06344 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
P06344 Actl10-202ENSMUST00000226583 1501 ntBASIC14.98□□□□□ -0.01
P06344 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
P06344 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
P06344 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Gm13216-201ENSMUST00000117145 591 ntBASIC14.98□□□□□ -0.01
P06344 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.98□□□□□ -0.01
P06344 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
P06344 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.98□□□□□ -0.01
P06344 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
P06344 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.98□□□□□ -0.01
P06344 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.98□□□□□ -0.01
P06344 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
P06344 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
P06344 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
P06344 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
P06344 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.97□□□□□ -0.01
P06344 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.97□□□□□ -0.01
P06344 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P06344 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.96□□□□□ -0.01
P06344 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Gm26039-201ENSMUST00000158152 144 ntBASIC14.96□□□□□ -0.01
P06344 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
P06344 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
P06344 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
P06344 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
P06344 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
P06344 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
P06344 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.95□□□□□ -0.02
P06344 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.95□□□□□ -0.02
P06344 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Gm6345-202ENSMUST00000180900 204 ntBASIC14.95□□□□□ -0.02
P06344 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
P06344 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
P06344 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms