Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.6■□□□□ 0.41
P04214 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
P04214 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.6■□□□□ 0.41
P04214 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04214 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
P04214 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.59■□□□□ 0.41
P04214 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
P04214 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Gm15590-201ENSMUST00000078419 552 ntBASIC17.59■□□□□ 0.41
P04214 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04214 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04214 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04214 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
P04214 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04214 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P04214 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
P04214 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
P04214 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.58■□□□□ 0.4
P04214 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
P04214 Gm15173-201ENSMUST00000122049 433 ntBASIC17.58■□□□□ 0.4
P04214 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
P04214 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.58■□□□□ 0.4
P04214 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.58■□□□□ 0.4
P04214 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P04214 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.57■□□□□ 0.4
P04214 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.57■□□□□ 0.4
P04214 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.57■□□□□ 0.4
P04214 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.57■□□□□ 0.4
P04214 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Gm12260-201ENSMUST00000122447 411 ntBASIC17.57■□□□□ 0.4
P04214 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
P04214 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.57■□□□□ 0.4
P04214 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.57■□□□□ 0.4
P04214 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
P04214 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
P04214 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.56■□□□□ 0.4
P04214 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
P04214 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
P04214 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.56■□□□□ 0.4
P04214 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
P04214 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P04214 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04214 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P04214 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
P04214 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
P04214 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P04214 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.55■□□□□ 0.4
P04214 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
P04214 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.55■□□□□ 0.4
P04214 Gm2756-201ENSMUST00000195851 400 ntBASIC17.55■□□□□ 0.4
P04214 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.55■□□□□ 0.4
P04214 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.55■□□□□ 0.4
P04214 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms