Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm6623-201ENSMUST00000173570 544 ntBASIC18.13■□□□□ 0.49
Vti1aO89116 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.13■□□□□ 0.49
Vti1aO89116 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Gm10566-201ENSMUST00000086739 996 ntBASIC18.13■□□□□ 0.49
Vti1aO89116 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vti1aO89116 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vti1aO89116 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.12■□□□□ 0.49
Vti1aO89116 Gm17971-201ENSMUST00000190239 806 ntBASIC18.12■□□□□ 0.49
Vti1aO89116 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.12■□□□□ 0.49
Vti1aO89116 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vti1aO89116 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.11■□□□□ 0.49
Vti1aO89116 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Gm18958-201ENSMUST00000174258 762 ntBASIC18.11■□□□□ 0.49
Vti1aO89116 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.11■□□□□ 0.49
Vti1aO89116 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.11■□□□□ 0.49
Vti1aO89116 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Vti1aO89116 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Vti1aO89116 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.11■□□□□ 0.49
Vti1aO89116 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.11■□□□□ 0.49
Vti1aO89116 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vti1aO89116 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vti1aO89116 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vti1aO89116 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vti1aO89116 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vti1aO89116 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vti1aO89116 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.1■□□□□ 0.49
Vti1aO89116 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Vti1aO89116 Gm28033-201ENSMUST00000184224 96 ntBASIC18.1■□□□□ 0.49
Vti1aO89116 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.1■□□□□ 0.49
Vti1aO89116 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vti1aO89116 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vti1aO89116 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.09■□□□□ 0.49
Vti1aO89116 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.09■□□□□ 0.49
Vti1aO89116 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Gm11950-201ENSMUST00000121615 838 ntBASIC18.09■□□□□ 0.49
Vti1aO89116 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.09■□□□□ 0.49
Vti1aO89116 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.09■□□□□ 0.49
Vti1aO89116 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vti1aO89116 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vti1aO89116 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Vti1aO89116 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vti1aO89116 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Vti1aO89116 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vti1aO89116 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vti1aO89116 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vti1aO89116 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vti1aO89116 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms