Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm26308-201ENSMUST00000157768 69 ntBASIC17.29■□□□□ 0.36
Syn1O88935 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.29■□□□□ 0.36
Syn1O88935 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.29■□□□□ 0.36
Syn1O88935 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Syn1O88935 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.29■□□□□ 0.36
Syn1O88935 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.29■□□□□ 0.36
Syn1O88935 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Syn1O88935 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Gm8097-201ENSMUST00000117903 829 ntBASIC17.28■□□□□ 0.36
Syn1O88935 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.28■□□□□ 0.36
Syn1O88935 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Syn1O88935 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Syn1O88935 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
Syn1O88935 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Syn1O88935 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Syn1O88935 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Syn1O88935 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.27■□□□□ 0.36
Syn1O88935 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Syn1O88935 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.27■□□□□ 0.36
Syn1O88935 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Syn1O88935 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Syn1O88935 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Syn1O88935 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Syn1O88935 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Syn1O88935 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.27■□□□□ 0.35
Syn1O88935 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Syn1O88935 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syn1O88935 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Syn1O88935 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.26■□□□□ 0.35
Syn1O88935 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.26■□□□□ 0.35
Syn1O88935 Gm13312-201ENSMUST00000119631 718 ntBASIC17.26■□□□□ 0.35
Syn1O88935 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.26■□□□□ 0.35
Syn1O88935 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Gm15590-201ENSMUST00000078419 552 ntBASIC17.26■□□□□ 0.35
Syn1O88935 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Syn1O88935 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Syn1O88935 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Syn1O88935 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.25■□□□□ 0.35
Syn1O88935 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.25■□□□□ 0.35
Syn1O88935 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.25■□□□□ 0.35
Syn1O88935 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Syn1O88935 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.25■□□□□ 0.35
Syn1O88935 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Syn1O88935 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Syn1O88935 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
Syn1O88935 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms