Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Best1O88870 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Best1O88870 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.16■□□□□ 0.18
Best1O88870 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Best1O88870 Olfr129-201ENSMUST00000122318 993 ntBASIC16.16■□□□□ 0.18
Best1O88870 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.16■□□□□ 0.18
Best1O88870 Gm18669-201ENSMUST00000216049 778 ntBASIC16.16■□□□□ 0.18
Best1O88870 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Best1O88870 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.16■□□□□ 0.18
Best1O88870 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.16■□□□□ 0.18
Best1O88870 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Best1O88870 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Best1O88870 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.15■□□□□ 0.18
Best1O88870 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Best1O88870 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Mir3081-201ENSMUST00000175305 84 ntBASIC16.15■□□□□ 0.18
Best1O88870 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Best1O88870 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Best1O88870 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Best1O88870 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.14■□□□□ 0.17
Best1O88870 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Best1O88870 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.14■□□□□ 0.17
Best1O88870 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.14■□□□□ 0.17
Best1O88870 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Best1O88870 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Best1O88870 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Best1O88870 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.13■□□□□ 0.17
Best1O88870 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Best1O88870 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Best1O88870 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.13■□□□□ 0.17
Best1O88870 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Best1O88870 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.13■□□□□ 0.17
Best1O88870 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Best1O88870 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.12■□□□□ 0.17
Best1O88870 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.12■□□□□ 0.17
Best1O88870 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.12■□□□□ 0.17
Best1O88870 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Best1O88870 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.11■□□□□ 0.17
Best1O88870 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Best1O88870 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Best1O88870 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms