Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm23935-201ENSMUST00000102303 57 ntBASIC21.88■■□□□ 1.09
Nid2O88322 Gm24270-201ENSMUST00000102326 57 ntBASIC21.88■■□□□ 1.09
Nid2O88322 Gm12260-201ENSMUST00000122447 411 ntBASIC21.88■■□□□ 1.09
Nid2O88322 Gm24245-201ENSMUST00000157318 57 ntBASIC21.88■■□□□ 1.09
Nid2O88322 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.88■■□□□ 1.09
Nid2O88322 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Nid2O88322 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.87■■□□□ 1.09
Nid2O88322 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Gm14140-201ENSMUST00000119999 995 ntBASIC21.87■■□□□ 1.09
Nid2O88322 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.87■■□□□ 1.09
Nid2O88322 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Nid2O88322 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
Nid2O88322 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nid2O88322 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Nid2O88322 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nid2O88322 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nid2O88322 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.86■■□□□ 1.09
Nid2O88322 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nid2O88322 Gm14494-201ENSMUST00000118786 435 ntBASIC21.86■■□□□ 1.09
Nid2O88322 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nid2O88322 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.86■■□□□ 1.09
Nid2O88322 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.86■■□□□ 1.09
Nid2O88322 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Nid2O88322 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.85■■□□□ 1.09
Nid2O88322 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.85■■□□□ 1.09
Nid2O88322 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Gm6550-201ENSMUST00000187574 993 ntBASIC21.85■■□□□ 1.09
Nid2O88322 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 AV026068-213ENSMUST00000223675 1171 ntBASIC21.85■■□□□ 1.09
Nid2O88322 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.85■■□□□ 1.09
Nid2O88322 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nid2O88322 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nid2O88322 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nid2O88322 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.85■■□□□ 1.09
Nid2O88322 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.85■■□□□ 1.09
Nid2O88322 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.84■■□□□ 1.09
Nid2O88322 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.84■■□□□ 1.09
Nid2O88322 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Nid2O88322 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.84■■□□□ 1.09
Nid2O88322 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.84■■□□□ 1.09
Nid2O88322 Gm2756-201ENSMUST00000195851 400 ntBASIC21.84■■□□□ 1.09
Nid2O88322 Gm8969-201ENSMUST00000199694 526 ntBASIC21.84■■□□□ 1.09
Nid2O88322 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.84■■□□□ 1.09
Nid2O88322 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Gm15590-201ENSMUST00000078419 552 ntBASIC21.84■■□□□ 1.09
Nid2O88322 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.84■■□□□ 1.09
Nid2O88322 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nid2O88322 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
Nid2O88322 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nid2O88322 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nid2O88322 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nid2O88322 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nid2O88322 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.83■■□□□ 1.09
Nid2O88322 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Nid2O88322 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.83■■□□□ 1.09
Nid2O88322 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nid2O88322 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.83■■□□□ 1.09
Nid2O88322 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.83■■□□□ 1.09
Nid2O88322 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nid2O88322 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nid2O88322 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.83■■□□□ 1.08
Nid2O88322 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nid2O88322 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms