Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfdp1O88271 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfdp1O88271 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.97■□□□□ 0.95
Cfdp1O88271 Mir770-201ENSMUST00000103252 94 ntBASIC20.97■□□□□ 0.95
Cfdp1O88271 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.97■□□□□ 0.95
Cfdp1O88271 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfdp1O88271 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cfdp1O88271 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.97■□□□□ 0.95
Cfdp1O88271 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.96■□□□□ 0.95
Cfdp1O88271 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.96■□□□□ 0.95
Cfdp1O88271 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.96■□□□□ 0.95
Cfdp1O88271 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
Cfdp1O88271 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.96■□□□□ 0.95
Cfdp1O88271 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cfdp1O88271 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfdp1O88271 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.95■□□□□ 0.94
Cfdp1O88271 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfdp1O88271 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.95■□□□□ 0.94
Cfdp1O88271 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfdp1O88271 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.95■□□□□ 0.94
Cfdp1O88271 Gm6623-201ENSMUST00000173570 544 ntBASIC20.95■□□□□ 0.94
Cfdp1O88271 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfdp1O88271 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfdp1O88271 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfdp1O88271 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cfdp1O88271 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cfdp1O88271 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cfdp1O88271 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.94■□□□□ 0.94
Cfdp1O88271 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.93■□□□□ 0.94
Cfdp1O88271 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cfdp1O88271 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Cfdp1O88271 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.93■□□□□ 0.94
Cfdp1O88271 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cfdp1O88271 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfdp1O88271 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cfdp1O88271 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Gm11950-201ENSMUST00000121615 838 ntBASIC20.92■□□□□ 0.94
Cfdp1O88271 Gm7284-201ENSMUST00000131667 944 ntBASIC20.92■□□□□ 0.94
Cfdp1O88271 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.92■□□□□ 0.94
Cfdp1O88271 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.92■□□□□ 0.94
Cfdp1O88271 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfdp1O88271 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cfdp1O88271 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms