Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.29■□□□□ 0.04
Alx3O70137 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Alx3O70137 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Alx3O70137 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Alx3O70137 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Gm15378-201ENSMUST00000121894 207 ntBASIC15.28■□□□□ 0.04
Alx3O70137 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.28■□□□□ 0.04
Alx3O70137 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.28■□□□□ 0.04
Alx3O70137 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Alx3O70137 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Alx3O70137 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.27■□□□□ 0.04
Alx3O70137 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Alx3O70137 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Alx3O70137 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.27■□□□□ 0.04
Alx3O70137 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Gm29257-201ENSMUST00000186115 639 ntBASIC15.27■□□□□ 0.04
Alx3O70137 Gm43183-201ENSMUST00000200632 547 ntBASIC15.27■□□□□ 0.04
Alx3O70137 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Alx3O70137 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.27■□□□□ 0.04
Alx3O70137 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.27■□□□□ 0.04
Alx3O70137 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx3O70137 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx3O70137 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx3O70137 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Alx3O70137 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Alx3O70137 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Alx3O70137 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Alx3O70137 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Alx3O70137 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.26■□□□□ 0.03
Alx3O70137 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.26■□□□□ 0.03
Alx3O70137 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.26■□□□□ 0.03
Alx3O70137 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.26■□□□□ 0.03
Alx3O70137 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Alx3O70137 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx3O70137 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.25■□□□□ 0.03
Alx3O70137 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Alx3O70137 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.25■□□□□ 0.03
Alx3O70137 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx3O70137 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.25■□□□□ 0.03
Alx3O70137 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.24■□□□□ 0.03
Alx3O70137 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms