Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cxcl13O55038 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Gm29707-201ENSMUST00000196325 491 ntBASIC14.22□□□□□ -0.13
Cxcl13O55038 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cxcl13O55038 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.22□□□□□ -0.13
Cxcl13O55038 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.21□□□□□ -0.13
Cxcl13O55038 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.21□□□□□ -0.13
Cxcl13O55038 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.21□□□□□ -0.13
Cxcl13O55038 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Gm15794-201ENSMUST00000120182 631 ntBASIC14.21□□□□□ -0.13
Cxcl13O55038 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Gm17971-201ENSMUST00000190239 806 ntBASIC14.21□□□□□ -0.13
Cxcl13O55038 Gm18421-201ENSMUST00000204122 625 ntBASIC14.21□□□□□ -0.13
Cxcl13O55038 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cxcl13O55038 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cxcl13O55038 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl13O55038 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl13O55038 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl13O55038 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cxcl13O55038 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cxcl13O55038 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl13O55038 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl13O55038 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cxcl13O55038 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cxcl13O55038 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.2□□□□□ -0.14
Cxcl13O55038 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cxcl13O55038 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.2□□□□□ -0.14
Cxcl13O55038 Olfr129-201ENSMUST00000122318 993 ntBASIC14.2□□□□□ -0.14
Cxcl13O55038 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.2□□□□□ -0.14
Cxcl13O55038 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cxcl13O55038 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.2□□□□□ -0.14
Cxcl13O55038 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl13O55038 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl13O55038 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl13O55038 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.19□□□□□ -0.14
Cxcl13O55038 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl13O55038 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cxcl13O55038 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cxcl13O55038 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.19□□□□□ -0.14
Cxcl13O55038 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl13O55038 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl13O55038 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms