Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DffbO54788 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DffbO54788 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DffbO54788 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.46□□□□□ -0.09
DffbO54788 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.46□□□□□ -0.09
DffbO54788 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.46□□□□□ -0.09
DffbO54788 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DffbO54788 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DffbO54788 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DffbO54788 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
DffbO54788 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DffbO54788 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
DffbO54788 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
DffbO54788 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Gm42545-201ENSMUST00000202755 922 ntBASIC14.45□□□□□ -0.1
DffbO54788 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
DffbO54788 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
DffbO54788 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DffbO54788 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DffbO54788 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DffbO54788 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.44□□□□□ -0.1
DffbO54788 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.44□□□□□ -0.1
DffbO54788 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.44□□□□□ -0.1
DffbO54788 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Gm27275-201ENSMUST00000184318 272 ntBASIC14.44□□□□□ -0.1
DffbO54788 Gm18025-201ENSMUST00000221733 862 ntBASIC14.44□□□□□ -0.1
DffbO54788 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DffbO54788 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
DffbO54788 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DffbO54788 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.43□□□□□ -0.1
DffbO54788 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.43□□□□□ -0.1
DffbO54788 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms