Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.05■□□□□ 0.32
Limk2O54785 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.05■□□□□ 0.32
Limk2O54785 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Limk2O54785 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Gm7284-201ENSMUST00000131667 944 ntBASIC17.05■□□□□ 0.32
Limk2O54785 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.05■□□□□ 0.32
Limk2O54785 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Limk2O54785 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Limk2O54785 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Limk2O54785 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Limk2O54785 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.04■□□□□ 0.32
Limk2O54785 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.04■□□□□ 0.32
Limk2O54785 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.04■□□□□ 0.32
Limk2O54785 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Limk2O54785 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
Limk2O54785 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Limk2O54785 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Limk2O54785 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Limk2O54785 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.03■□□□□ 0.32
Limk2O54785 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.03■□□□□ 0.32
Limk2O54785 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.03■□□□□ 0.32
Limk2O54785 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.03■□□□□ 0.32
Limk2O54785 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.03■□□□□ 0.32
Limk2O54785 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.03■□□□□ 0.32
Limk2O54785 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Limk2O54785 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Limk2O54785 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Limk2O54785 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Limk2O54785 Gm27389-201ENSMUST00000183622 195 ntBASIC17.02■□□□□ 0.32
Limk2O54785 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Limk2O54785 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Limk2O54785 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.02■□□□□ 0.31
Limk2O54785 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Limk2O54785 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.02■□□□□ 0.31
Limk2O54785 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Limk2O54785 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.01■□□□□ 0.31
Limk2O54785 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.01■□□□□ 0.31
Limk2O54785 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.01■□□□□ 0.31
Limk2O54785 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Limk2O54785 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.01■□□□□ 0.31
Limk2O54785 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms