Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.5■□□□□ 0.55
SpibO35906 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.5■□□□□ 0.55
SpibO35906 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.5■□□□□ 0.55
SpibO35906 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
SpibO35906 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.49■□□□□ 0.55
SpibO35906 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.49■□□□□ 0.55
SpibO35906 Gm44357-201ENSMUST00000195897 142 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm19658-201ENSMUST00000196231 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44367-201ENSMUST00000196836 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44350-201ENSMUST00000197197 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44390-201ENSMUST00000197533 144 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44313-201ENSMUST00000198018 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44486-201ENSMUST00000198508 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44454-201ENSMUST00000198541 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44314-201ENSMUST00000199263 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44394-201ENSMUST00000199558 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44484-201ENSMUST00000199873 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44466-201ENSMUST00000200264 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Gm44359-201ENSMUST00000200671 138 ntBASIC18.49■□□□□ 0.55
SpibO35906 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.49■□□□□ 0.55
SpibO35906 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SpibO35906 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SpibO35906 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SpibO35906 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SpibO35906 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.48■□□□□ 0.55
SpibO35906 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.48■□□□□ 0.55
SpibO35906 Gm15165-201ENSMUST00000118140 502 ntBASIC18.48■□□□□ 0.55
SpibO35906 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Gm6296-201ENSMUST00000222599 943 ntBASIC18.48■□□□□ 0.55
SpibO35906 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
SpibO35906 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SpibO35906 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SpibO35906 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.47■□□□□ 0.55
SpibO35906 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SpibO35906 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Gm6443-201ENSMUST00000203599 874 ntBASIC18.47■□□□□ 0.55
SpibO35906 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SpibO35906 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SpibO35906 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
SpibO35906 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SpibO35906 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.47■□□□□ 0.55
SpibO35906 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SpibO35906 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.46■□□□□ 0.55
SpibO35906 Gm43514-201ENSMUST00000198852 424 ntBASIC18.46■□□□□ 0.55
SpibO35906 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SpibO35906 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.46■□□□□ 0.55
SpibO35906 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SpibO35906 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SpibO35906 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SpibO35906 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SpibO35906 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.45■□□□□ 0.54
SpibO35906 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
SpibO35906 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SpibO35906 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.45■□□□□ 0.54
SpibO35906 Rps4l-201ENSMUST00000071745 943 ntBASIC18.45■□□□□ 0.54
SpibO35906 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SpibO35906 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms