Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Stx1aO35526 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Gm13158-201ENSMUST00000122007 736 ntBASIC18.94■□□□□ 0.62
Stx1aO35526 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Stx1aO35526 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stx1aO35526 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Stx1aO35526 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Stx1aO35526 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Gm24841-201ENSMUST00000158676 357 ntBASIC18.93■□□□□ 0.62
Stx1aO35526 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.93■□□□□ 0.62
Stx1aO35526 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.93■□□□□ 0.62
Stx1aO35526 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Stx1aO35526 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Stx1aO35526 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stx1aO35526 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Stx1aO35526 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Stx1aO35526 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.92■□□□□ 0.62
Stx1aO35526 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.92■□□□□ 0.62
Stx1aO35526 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Stx1aO35526 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Stx1aO35526 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.92■□□□□ 0.62
Stx1aO35526 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stx1aO35526 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Stx1aO35526 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.91■□□□□ 0.62
Stx1aO35526 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.91■□□□□ 0.62
Stx1aO35526 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Stx1aO35526 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Stx1aO35526 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.91■□□□□ 0.62
Stx1aO35526 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stx1aO35526 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stx1aO35526 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms