Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.96■□□□□ 0.47
Clcn6O35454 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.96■□□□□ 0.47
Clcn6O35454 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.96■□□□□ 0.47
Clcn6O35454 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Clcn6O35454 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcn6O35454 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Clcn6O35454 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.95■□□□□ 0.46
Clcn6O35454 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Gm2399-201ENSMUST00000104944 225 ntBASIC17.95■□□□□ 0.46
Clcn6O35454 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Clcn6O35454 Gm5656-201ENSMUST00000171020 1096 ntBASIC17.95■□□□□ 0.46
Clcn6O35454 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.95■□□□□ 0.46
Clcn6O35454 Gm44552-201ENSMUST00000205458 1247 ntBASIC17.95■□□□□ 0.46
Clcn6O35454 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clcn6O35454 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Clcn6O35454 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clcn6O35454 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Clcn6O35454 Gm12001-201ENSMUST00000121727 913 ntBASIC17.94■□□□□ 0.46
Clcn6O35454 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Gm7430-201ENSMUST00000193824 1144 ntBASIC17.94■□□□□ 0.46
Clcn6O35454 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC17.94■□□□□ 0.46
Clcn6O35454 CT025552.1-201ENSMUST00000224561 521 ntBASIC17.94■□□□□ 0.46
Clcn6O35454 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clcn6O35454 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Clcn6O35454 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcn6O35454 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.94■□□□□ 0.46
Clcn6O35454 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clcn6O35454 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Gm13033-201ENSMUST00000117591 1057 ntBASIC17.93■□□□□ 0.46
Clcn6O35454 Gm13899-201ENSMUST00000121519 1255 ntBASIC17.93■□□□□ 0.46
Clcn6O35454 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC17.93■□□□□ 0.46
Clcn6O35454 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.93■□□□□ 0.46
Clcn6O35454 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.93■□□□□ 0.46
Clcn6O35454 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clcn6O35454 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Clcn6O35454 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcn6O35454 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.92■□□□□ 0.46
Clcn6O35454 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Gm10653-202ENSMUST00000139570 835 ntBASIC17.92■□□□□ 0.46
Clcn6O35454 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clcn6O35454 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.92■□□□□ 0.46
Clcn6O35454 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Clcn6O35454 AC153932.1-201ENSMUST00000218558 787 ntBASIC17.92■□□□□ 0.46
Clcn6O35454 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clcn6O35454 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC17.92■□□□□ 0.46
Clcn6O35454 Gm43981-201ENSMUST00000203285 1467 ntBASIC17.92■□□□□ 0.46
Clcn6O35454 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.92■□□□□ 0.46
Clcn6O35454 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clcn6O35454 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clcn6O35454 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Clcn6O35454 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clcn6O35454 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms