Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.27□□□□□ -0.12
Prrt1O35449 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Prrt1O35449 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prrt1O35449 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prrt1O35449 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prrt1O35449 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prrt1O35449 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prrt1O35449 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prrt1O35449 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prrt1O35449 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Prrt1O35449 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Prrt1O35449 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Zfp783-201ENSMUST00000095946 670 ntBASIC14.27□□□□□ -0.13
Prrt1O35449 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.27□□□□□ -0.13
Prrt1O35449 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Prrt1O35449 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Prrt1O35449 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Prrt1O35449 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prrt1O35449 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Prrt1O35449 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Gm2399-201ENSMUST00000104944 225 ntBASIC14.26□□□□□ -0.13
Prrt1O35449 Mir2861-201ENSMUST00000175539 82 ntBASIC14.26□□□□□ -0.13
Prrt1O35449 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.26□□□□□ -0.13
Prrt1O35449 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Prrt1O35449 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Prrt1O35449 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prrt1O35449 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prrt1O35449 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.25□□□□□ -0.13
Prrt1O35449 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Prrt1O35449 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prrt1O35449 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prrt1O35449 Gm45417-201ENSMUST00000209533 758 ntBASIC14.25□□□□□ -0.13
Prrt1O35449 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Prrt1O35449 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.25□□□□□ -0.13
Prrt1O35449 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prrt1O35449 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prrt1O35449 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prrt1O35449 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prrt1O35449 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Prrt1O35449 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.24□□□□□ -0.13
Prrt1O35449 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Gm42778-201ENSMUST00000199644 553 ntBASIC14.24□□□□□ -0.13
Prrt1O35449 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prrt1O35449 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Prrt1O35449 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prrt1O35449 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms