Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 Mir5126-201ENSMUST00000175513 77 ntBASIC21.54■■□□□ 1.04
Col15a1O35206 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.54■■□□□ 1.04
Col15a1O35206 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.54■■□□□ 1.04
Col15a1O35206 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.54■■□□□ 1.04
Col15a1O35206 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.54■■□□□ 1.04
Col15a1O35206 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col15a1O35206 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.53■■□□□ 1.04
Col15a1O35206 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.53■■□□□ 1.04
Col15a1O35206 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Col15a1O35206 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.53■■□□□ 1.04
Col15a1O35206 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Col15a1O35206 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Col15a1O35206 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col15a1O35206 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.52■■□□□ 1.04
Col15a1O35206 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col15a1O35206 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.52■■□□□ 1.04
Col15a1O35206 Gm25745-201ENSMUST00000174945 133 ntBASIC21.52■■□□□ 1.04
Col15a1O35206 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col15a1O35206 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.52■■□□□ 1.04
Col15a1O35206 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col15a1O35206 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col15a1O35206 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.52■■□□□ 1.04
Col15a1O35206 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col15a1O35206 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.52■■□□□ 1.03
Col15a1O35206 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.51■■□□□ 1.03
Col15a1O35206 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col15a1O35206 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col15a1O35206 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.51■■□□□ 1.03
Col15a1O35206 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.51■■□□□ 1.03
Col15a1O35206 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.51■■□□□ 1.03
Col15a1O35206 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col15a1O35206 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col15a1O35206 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Gm8969-201ENSMUST00000199694 526 ntBASIC21.5■■□□□ 1.03
Col15a1O35206 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.5■■□□□ 1.03
Col15a1O35206 Gm7506-201ENSMUST00000207758 815 ntBASIC21.5■■□□□ 1.03
Col15a1O35206 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Gm5364-201ENSMUST00000216789 889 ntBASIC21.5■■□□□ 1.03
Col15a1O35206 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.5■■□□□ 1.03
Col15a1O35206 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Col15a1O35206 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Col15a1O35206 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col15a1O35206 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Col15a1O35206 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.49■■□□□ 1.03
Col15a1O35206 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Col15a1O35206 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Col15a1O35206 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.49■■□□□ 1.03
Col15a1O35206 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col15a1O35206 Gm25990-201ENSMUST00000102440 86 ntBASIC21.48■■□□□ 1.03
Col15a1O35206 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
Col15a1O35206 Gm11779-201ENSMUST00000118541 368 ntBASIC21.48■■□□□ 1.03
Col15a1O35206 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.48■■□□□ 1.03
Col15a1O35206 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.48■■□□□ 1.03
Col15a1O35206 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Col15a1O35206 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col15a1O35206 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Col15a1O35206 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.48■■□□□ 1.03
Col15a1O35206 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Col15a1O35206 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms