Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.21■□□□□ 0.51
Ube3aO08759 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3aO08759 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube3aO08759 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3aO08759 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3aO08759 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3aO08759 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3aO08759 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3aO08759 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ube3aO08759 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ube3aO08759 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ube3aO08759 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.2■□□□□ 0.5
Ube3aO08759 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Gm2559-201ENSMUST00000201323 363 ntBASIC18.2■□□□□ 0.5
Ube3aO08759 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.2■□□□□ 0.5
Ube3aO08759 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ube3aO08759 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ube3aO08759 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Ube3aO08759 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3aO08759 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ube3aO08759 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Gm10653-202ENSMUST00000139570 835 ntBASIC18.19■□□□□ 0.5
Ube3aO08759 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.19■□□□□ 0.5
Ube3aO08759 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3aO08759 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.18■□□□□ 0.5
Ube3aO08759 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ube3aO08759 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Ube3aO08759 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.18■□□□□ 0.5
Ube3aO08759 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ube3aO08759 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3aO08759 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Gm12527-201ENSMUST00000117967 564 ntBASIC18.17■□□□□ 0.5
Ube3aO08759 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.17■□□□□ 0.5
Ube3aO08759 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.17■□□□□ 0.5
Ube3aO08759 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3aO08759 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube3aO08759 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ube3aO08759 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube3aO08759 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ube3aO08759 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.16■□□□□ 0.5
Ube3aO08759 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ube3aO08759 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.16■□□□□ 0.5
Ube3aO08759 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.16■□□□□ 0.5
Ube3aO08759 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.16■□□□□ 0.5
Ube3aO08759 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ube3aO08759 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms