Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp35M0QWN7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp35M0QWN7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.02■□□□□ 0.48
Usp35M0QWN7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp35M0QWN7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp35M0QWN7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp35M0QWN7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp35M0QWN7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp35M0QWN7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp35M0QWN7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Usp35M0QWN7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Gm27389-201ENSMUST00000183622 195 ntBASIC18.01■□□□□ 0.47
Usp35M0QWN7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Usp35M0QWN7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Mir1668-201ENSMUST00000184114 107 ntBASIC18■□□□□ 0.47
Usp35M0QWN7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Usp35M0QWN7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18■□□□□ 0.47
Usp35M0QWN7 Gm21559-201ENSMUST00000220638 855 ntBASIC18■□□□□ 0.47
Usp35M0QWN7 Gm8587-201ENSMUST00000076538 843 ntBASIC18■□□□□ 0.47
Usp35M0QWN7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp35M0QWN7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Usp35M0QWN7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp35M0QWN7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.99■□□□□ 0.47
Usp35M0QWN7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms